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Commit 9227329f authored by Jesse Mapel's avatar Jesse Mapel Committed by jlaura
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Adds capability to read ISIS v5 binary control networks (#101) 

* Added V5 protobuf files

* First pass at v5 control network reader

* parameterized cnet read test
parent f970c7ed
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plio/examples/ControlNetworks/apollo_out_v5.net 0 → 100644
+ 0
− 0
View file @ 9227329f
File added
plio/io/ControlNetFileHeaderV0005_pb2.py 0 → 100644
+ 119
− 0
View file @ 9227329f
# -*- coding: utf-8 -*-
# Generated by the protocol buffer compiler. DO NOT EDIT!
# source: ControlNetFileHeaderV0005.proto
import sys
_b=sys.version_info[0]<3 and (lambda x:x) or (lambda x:x.encode('latin1'))
from google.protobuf import descriptor as _descriptor
from google.protobuf import message as _message
from google.protobuf import reflection as _reflection
from google.protobuf import symbol_database as _symbol_database
# @@protoc_insertion_point(imports)
_sym_db = _symbol_database.Default()
DESCRIPTOR = _descriptor.FileDescriptor(
name='ControlNetFileHeaderV0005.proto',
package='Isis',
syntax='proto2',
serialized_options=None,
serialized_pb=_b('\n\x1f\x43ontrolNetFileHeaderV0005.proto\x12\x04Isis\"\xb8\x01\n\x19\x43ontrolNetFileHeaderV0005\x12\x11\n\tnetworkId\x18\x01 \x02(\t\x12\x12\n\ntargetName\x18\x02 \x02(\t\x12\x0f\n\x07\x63reated\x18\x03 \x01(\t\x12\x14\n\x0clastModified\x18\x04 \x01(\t\x12\x13\n\x0b\x64\x65scription\x18\x05 \x01(\t\x12\x10\n\x08userName\x18\x06 \x01(\t\x12\x11\n\tnumPoints\x18\x07 \x01(\x05\x12\x13\n\x0btargetRadii\x18\n \x03(\x01')
)
_CONTROLNETFILEHEADERV0005 = _descriptor.Descriptor(
name='ControlNetFileHeaderV0005',
full_name='Isis.ControlNetFileHeaderV0005',
filename=None,
file=DESCRIPTOR,
containing_type=None,
fields=[
_descriptor.FieldDescriptor(
name='networkId', full_name='Isis.ControlNetFileHeaderV0005.networkId', index=0,
number=1, type=9, cpp_type=9, label=2,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='targetName', full_name='Isis.ControlNetFileHeaderV0005.targetName', index=1,
number=2, type=9, cpp_type=9, label=2,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='created', full_name='Isis.ControlNetFileHeaderV0005.created', index=2,
number=3, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='lastModified', full_name='Isis.ControlNetFileHeaderV0005.lastModified', index=3,
number=4, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='description', full_name='Isis.ControlNetFileHeaderV0005.description', index=4,
number=5, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='userName', full_name='Isis.ControlNetFileHeaderV0005.userName', index=5,
number=6, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='numPoints', full_name='Isis.ControlNetFileHeaderV0005.numPoints', index=6,
number=7, type=5, cpp_type=1, label=1,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='targetRadii', full_name='Isis.ControlNetFileHeaderV0005.targetRadii', index=7,
number=10, type=1, cpp_type=5, label=3,
has_default_value=False, default_value=[],
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
],
extensions=[
],
nested_types=[],
enum_types=[
],
serialized_options=None,
is_extendable=False,
syntax='proto2',
extension_ranges=[],
oneofs=[
],
serialized_start=42,
serialized_end=226,
)
DESCRIPTOR.message_types_by_name['ControlNetFileHeaderV0005'] = _CONTROLNETFILEHEADERV0005
_sym_db.RegisterFileDescriptor(DESCRIPTOR)
ControlNetFileHeaderV0005 = _reflection.GeneratedProtocolMessageType('ControlNetFileHeaderV0005', (_message.Message,), dict(
DESCRIPTOR = _CONTROLNETFILEHEADERV0005,
__module__ = 'ControlNetFileHeaderV0005_pb2'
# @@protoc_insertion_point(class_scope:Isis.ControlNetFileHeaderV0005)
))
_sym_db.RegisterMessage(ControlNetFileHeaderV0005)
# @@protoc_insertion_point(module_scope)
plio/io/ControlPointFileEntryV0005_pb2.py 0 → 100644
+ 634
− 0
View file @ 9227329f
# -*- coding: utf-8 -*-
# Generated by the protocol buffer compiler. DO NOT EDIT!
# source: ControlPointFileEntryV0005.proto
import sys
_b=sys.version_info[0]<3 and (lambda x:x) or (lambda x:x.encode('latin1'))
from google.protobuf import descriptor as _descriptor
from google.protobuf import message as _message
from google.protobuf import reflection as _reflection
from google.protobuf import symbol_database as _symbol_database
# @@protoc_insertion_point(imports)
_sym_db = _symbol_database.Default()
DESCRIPTOR = _descriptor.FileDescriptor(
name='ControlPointFileEntryV0005.proto',
package='Isis',
syntax='proto2',
serialized_options=None,
serialized_pb=_b('\n ControlPointFileEntryV0005.proto\x12\x04Isis\"\x82\x0e\n\x1a\x43ontrolPointFileEntryV0005\x12\n\n\x02id\x18\x01 \x02(\t\x12\x38\n\x04type\x18\x02 \x02(\x0e\x32*.Isis.ControlPointFileEntryV0005.PointType\x12\x13\n\x0b\x63hooserName\x18\x03 \x01(\t\x12\x10\n\x08\x64\x61tetime\x18\x04 \x01(\t\x12\x10\n\x08\x65\x64itLock\x18\x05 \x01(\x08\x12\x0e\n\x06ignore\x18\x06 \x01(\x08\x12\x16\n\x0ejigsawRejected\x18\x07 \x01(\x08\x12\x16\n\x0ereferenceIndex\x18\x08 \x01(\x05\x12N\n\x16\x61prioriSurfPointSource\x18\t \x01(\x0e\x32..Isis.ControlPointFileEntryV0005.AprioriSource\x12\"\n\x1a\x61prioriSurfPointSourceFile\x18\n \x01(\t\x12K\n\x13\x61prioriRadiusSource\x18\x0b \x01(\x0e\x32..Isis.ControlPointFileEntryV0005.AprioriSource\x12\x1f\n\x17\x61prioriRadiusSourceFile\x18\x0c \x01(\t\x12\x1b\n\x13latitudeConstrained\x18\r \x01(\x08\x12\x1c\n\x14longitudeConstrained\x18\x0e \x01(\x08\x12\x19\n\x11radiusConstrained\x18\x0f \x01(\x08\x12\x10\n\x08\x61prioriX\x18\x10 \x01(\x01\x12\x10\n\x08\x61prioriY\x18\x11 \x01(\x01\x12\x10\n\x08\x61prioriZ\x18\x12 \x01(\x01\x12\x18\n\x0c\x61prioriCovar\x18\x13 \x03(\x01\x42\x02\x10\x01\x12\x11\n\tadjustedX\x18\x14 \x01(\x01\x12\x11\n\tadjustedY\x18\x15 \x01(\x01\x12\x11\n\tadjustedZ\x18\x16 \x01(\x01\x12\x19\n\radjustedCovar\x18\x17 \x03(\x01\x42\x02\x10\x01\x12:\n\x03log\x18\x18 \x03(\x0b\x32-.Isis.ControlPointFileEntryV0005.PointLogData\x12:\n\x08measures\x18\x19 \x03(\x0b\x32(.Isis.ControlPointFileEntryV0005.Measure\x1al\n\x0cPointLogData\x12\x16\n\x0e\x64oubleDataType\x18\x01 \x01(\x05\x12\x17\n\x0f\x64oubleDataValue\x18\x02 \x01(\x01\x12\x14\n\x0c\x62oolDataType\x18\x03 \x01(\x05\x12\x15\n\rboolDataValue\x18\x04 \x01(\x08\x1a\x83\x05\n\x07Measure\x12\x14\n\x0cserialnumber\x18\x01 \x02(\t\x12\x42\n\x04type\x18\x02 \x02(\x0e\x32\x34.Isis.ControlPointFileEntryV0005.Measure.MeasureType\x12\x0e\n\x06sample\x18\x03 \x01(\x01\x12\x0c\n\x04line\x18\x04 \x01(\x01\x12\x16\n\x0esampleResidual\x18\x05 \x01(\x01\x12\x14\n\x0clineResidual\x18\x06 \x01(\x01\x12\x13\n\x0b\x63hoosername\x18\x07 \x01(\t\x12\x10\n\x08\x64\x61tetime\x18\x08 \x01(\t\x12\x10\n\x08\x65\x64itLock\x18\t \x01(\x08\x12\x0e\n\x06ignore\x18\n \x01(\x08\x12\x16\n\x0ejigsawRejected\x18\x0b \x01(\x08\x12\x10\n\x08\x64iameter\x18\x0c \x01(\x01\x12\x15\n\rapriorisample\x18\r \x01(\x01\x12\x13\n\x0b\x61prioriline\x18\x0e \x01(\x01\x12\x13\n\x0bsamplesigma\x18\x0f \x01(\x01\x12\x11\n\tlinesigma\x18\x10 \x01(\x01\x12\x44\n\x03log\x18\x11 \x03(\x0b\x32\x37.Isis.ControlPointFileEntryV0005.Measure.MeasureLogData\x1an\n\x0eMeasureLogData\x12\x16\n\x0e\x64oubleDataType\x18\x01 \x01(\x05\x12\x17\n\x0f\x64oubleDataValue\x18\x02 \x01(\x01\x12\x14\n\x0c\x62oolDataType\x18\x03 \x01(\x05\x12\x15\n\rboolDataValue\x18\x04 \x01(\x08\"U\n\x0bMeasureType\x12\r\n\tCandidate\x10\x00\x12\n\n\x06Manual\x10\x01\x12\x13\n\x0fRegisteredPixel\x10\x02\x12\x16\n\x12RegisteredSubPixel\x10\x03\"X\n\tPointType\x12\x08\n\x04\x46ree\x10\x02\x12\x0f\n\x0b\x43onstrained\x10\x03\x12\t\n\x05\x46ixed\x10\x04\x12\x10\n\x0cobsolete_Tie\x10\x00\x12\x13\n\x0fobsolete_Ground\x10\x01\"\x82\x01\n\rAprioriSource\x12\x08\n\x04None\x10\x00\x12\x08\n\x04User\x10\x01\x12\x15\n\x11\x41verageOfMeasures\x10\x02\x12\r\n\tReference\x10\x03\x12\r\n\tEllipsoid\x10\x04\x12\x07\n\x03\x44\x45M\x10\x05\x12\x0b\n\x07\x42\x61semap\x10\x06\x12\x12\n\x0e\x42undleSolution\x10\x07')
)
_CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURETYPE = _descriptor.EnumDescriptor(
name='MeasureType',
full_name='Isis.ControlPointFileEntryV0005.Measure.MeasureType',
filename=None,
file=DESCRIPTOR,
values=[
_descriptor.EnumValueDescriptor(
name='Candidate', index=0, number=0,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='Manual', index=1, number=1,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='RegisteredPixel', index=2, number=2,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='RegisteredSubPixel', index=3, number=3,
serialized_options=None,
type=None),
],
containing_type=None,
serialized_options=None,
serialized_start=1529,
serialized_end=1614,
)
_sym_db.RegisterEnumDescriptor(_CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURETYPE)
_CONTROLPOINTFILEENTRYV0005_POINTTYPE = _descriptor.EnumDescriptor(
name='PointType',
full_name='Isis.ControlPointFileEntryV0005.PointType',
filename=None,
file=DESCRIPTOR,
values=[
_descriptor.EnumValueDescriptor(
name='Free', index=0, number=2,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='Constrained', index=1, number=3,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='Fixed', index=2, number=4,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='obsolete_Tie', index=3, number=0,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='obsolete_Ground', index=4, number=1,
serialized_options=None,
type=None),
],
containing_type=None,
serialized_options=None,
serialized_start=1616,
serialized_end=1704,
)
_sym_db.RegisterEnumDescriptor(_CONTROLPOINTFILEENTRYV0005_POINTTYPE)
_CONTROLPOINTFILEENTRYV0005_APRIORISOURCE = _descriptor.EnumDescriptor(
name='AprioriSource',
full_name='Isis.ControlPointFileEntryV0005.AprioriSource',
filename=None,
file=DESCRIPTOR,
values=[
_descriptor.EnumValueDescriptor(
name='None', index=0, number=0,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='User', index=1, number=1,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='AverageOfMeasures', index=2, number=2,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='Reference', index=3, number=3,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='Ellipsoid', index=4, number=4,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='DEM', index=5, number=5,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='Basemap', index=6, number=6,
serialized_options=None,
type=None),
_descriptor.EnumValueDescriptor(
name='BundleSolution', index=7, number=7,
serialized_options=None,
type=None),
],
containing_type=None,
serialized_options=None,
serialized_start=1707,
serialized_end=1837,
)
_sym_db.RegisterEnumDescriptor(_CONTROLPOINTFILEENTRYV0005_APRIORISOURCE)
_CONTROLPOINTFILEENTRYV0005_POINTLOGDATA = _descriptor.Descriptor(
name='PointLogData',
full_name='Isis.ControlPointFileEntryV0005.PointLogData',
filename=None,
file=DESCRIPTOR,
containing_type=None,
fields=[
_descriptor.FieldDescriptor(
name='doubleDataType', full_name='Isis.ControlPointFileEntryV0005.PointLogData.doubleDataType', index=0,
number=1, type=5, cpp_type=1, label=1,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='doubleDataValue', full_name='Isis.ControlPointFileEntryV0005.PointLogData.doubleDataValue', index=1,
number=2, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='boolDataType', full_name='Isis.ControlPointFileEntryV0005.PointLogData.boolDataType', index=2,
number=3, type=5, cpp_type=1, label=1,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='boolDataValue', full_name='Isis.ControlPointFileEntryV0005.PointLogData.boolDataValue', index=3,
number=4, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
],
extensions=[
],
nested_types=[],
enum_types=[
],
serialized_options=None,
is_extendable=False,
syntax='proto2',
extension_ranges=[],
oneofs=[
],
serialized_start=860,
serialized_end=968,
)
_CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURELOGDATA = _descriptor.Descriptor(
name='MeasureLogData',
full_name='Isis.ControlPointFileEntryV0005.Measure.MeasureLogData',
filename=None,
file=DESCRIPTOR,
containing_type=None,
fields=[
_descriptor.FieldDescriptor(
name='doubleDataType', full_name='Isis.ControlPointFileEntryV0005.Measure.MeasureLogData.doubleDataType', index=0,
number=1, type=5, cpp_type=1, label=1,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='doubleDataValue', full_name='Isis.ControlPointFileEntryV0005.Measure.MeasureLogData.doubleDataValue', index=1,
number=2, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='boolDataType', full_name='Isis.ControlPointFileEntryV0005.Measure.MeasureLogData.boolDataType', index=2,
number=3, type=5, cpp_type=1, label=1,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='boolDataValue', full_name='Isis.ControlPointFileEntryV0005.Measure.MeasureLogData.boolDataValue', index=3,
number=4, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
],
extensions=[
],
nested_types=[],
enum_types=[
],
serialized_options=None,
is_extendable=False,
syntax='proto2',
extension_ranges=[],
oneofs=[
],
serialized_start=1417,
serialized_end=1527,
)
_CONTROLPOINTFILEENTRYV0005_MEASURE = _descriptor.Descriptor(
name='Measure',
full_name='Isis.ControlPointFileEntryV0005.Measure',
filename=None,
file=DESCRIPTOR,
containing_type=None,
fields=[
_descriptor.FieldDescriptor(
name='serialnumber', full_name='Isis.ControlPointFileEntryV0005.Measure.serialnumber', index=0,
number=1, type=9, cpp_type=9, label=2,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='type', full_name='Isis.ControlPointFileEntryV0005.Measure.type', index=1,
number=2, type=14, cpp_type=8, label=2,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='sample', full_name='Isis.ControlPointFileEntryV0005.Measure.sample', index=2,
number=3, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='line', full_name='Isis.ControlPointFileEntryV0005.Measure.line', index=3,
number=4, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='sampleResidual', full_name='Isis.ControlPointFileEntryV0005.Measure.sampleResidual', index=4,
number=5, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='lineResidual', full_name='Isis.ControlPointFileEntryV0005.Measure.lineResidual', index=5,
number=6, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='choosername', full_name='Isis.ControlPointFileEntryV0005.Measure.choosername', index=6,
number=7, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='datetime', full_name='Isis.ControlPointFileEntryV0005.Measure.datetime', index=7,
number=8, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='editLock', full_name='Isis.ControlPointFileEntryV0005.Measure.editLock', index=8,
number=9, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='ignore', full_name='Isis.ControlPointFileEntryV0005.Measure.ignore', index=9,
number=10, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='jigsawRejected', full_name='Isis.ControlPointFileEntryV0005.Measure.jigsawRejected', index=10,
number=11, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='diameter', full_name='Isis.ControlPointFileEntryV0005.Measure.diameter', index=11,
number=12, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='apriorisample', full_name='Isis.ControlPointFileEntryV0005.Measure.apriorisample', index=12,
number=13, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriline', full_name='Isis.ControlPointFileEntryV0005.Measure.aprioriline', index=13,
number=14, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='samplesigma', full_name='Isis.ControlPointFileEntryV0005.Measure.samplesigma', index=14,
number=15, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='linesigma', full_name='Isis.ControlPointFileEntryV0005.Measure.linesigma', index=15,
number=16, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='log', full_name='Isis.ControlPointFileEntryV0005.Measure.log', index=16,
number=17, type=11, cpp_type=10, label=3,
has_default_value=False, default_value=[],
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
],
extensions=[
],
nested_types=[_CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURELOGDATA, ],
enum_types=[
_CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURETYPE,
],
serialized_options=None,
is_extendable=False,
syntax='proto2',
extension_ranges=[],
oneofs=[
],
serialized_start=971,
serialized_end=1614,
)
_CONTROLPOINTFILEENTRYV0005 = _descriptor.Descriptor(
name='ControlPointFileEntryV0005',
full_name='Isis.ControlPointFileEntryV0005',
filename=None,
file=DESCRIPTOR,
containing_type=None,
fields=[
_descriptor.FieldDescriptor(
name='id', full_name='Isis.ControlPointFileEntryV0005.id', index=0,
number=1, type=9, cpp_type=9, label=2,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='type', full_name='Isis.ControlPointFileEntryV0005.type', index=1,
number=2, type=14, cpp_type=8, label=2,
has_default_value=False, default_value=2,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='chooserName', full_name='Isis.ControlPointFileEntryV0005.chooserName', index=2,
number=3, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='datetime', full_name='Isis.ControlPointFileEntryV0005.datetime', index=3,
number=4, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='editLock', full_name='Isis.ControlPointFileEntryV0005.editLock', index=4,
number=5, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='ignore', full_name='Isis.ControlPointFileEntryV0005.ignore', index=5,
number=6, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='jigsawRejected', full_name='Isis.ControlPointFileEntryV0005.jigsawRejected', index=6,
number=7, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='referenceIndex', full_name='Isis.ControlPointFileEntryV0005.referenceIndex', index=7,
number=8, type=5, cpp_type=1, label=1,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriSurfPointSource', full_name='Isis.ControlPointFileEntryV0005.aprioriSurfPointSource', index=8,
number=9, type=14, cpp_type=8, label=1,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriSurfPointSourceFile', full_name='Isis.ControlPointFileEntryV0005.aprioriSurfPointSourceFile', index=9,
number=10, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriRadiusSource', full_name='Isis.ControlPointFileEntryV0005.aprioriRadiusSource', index=10,
number=11, type=14, cpp_type=8, label=1,
has_default_value=False, default_value=0,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriRadiusSourceFile', full_name='Isis.ControlPointFileEntryV0005.aprioriRadiusSourceFile', index=11,
number=12, type=9, cpp_type=9, label=1,
has_default_value=False, default_value=_b("").decode('utf-8'),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='latitudeConstrained', full_name='Isis.ControlPointFileEntryV0005.latitudeConstrained', index=12,
number=13, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='longitudeConstrained', full_name='Isis.ControlPointFileEntryV0005.longitudeConstrained', index=13,
number=14, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='radiusConstrained', full_name='Isis.ControlPointFileEntryV0005.radiusConstrained', index=14,
number=15, type=8, cpp_type=7, label=1,
has_default_value=False, default_value=False,
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriX', full_name='Isis.ControlPointFileEntryV0005.aprioriX', index=15,
number=16, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriY', full_name='Isis.ControlPointFileEntryV0005.aprioriY', index=16,
number=17, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriZ', full_name='Isis.ControlPointFileEntryV0005.aprioriZ', index=17,
number=18, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='aprioriCovar', full_name='Isis.ControlPointFileEntryV0005.aprioriCovar', index=18,
number=19, type=1, cpp_type=5, label=3,
has_default_value=False, default_value=[],
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=_b('\020\001'), file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='adjustedX', full_name='Isis.ControlPointFileEntryV0005.adjustedX', index=19,
number=20, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='adjustedY', full_name='Isis.ControlPointFileEntryV0005.adjustedY', index=20,
number=21, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='adjustedZ', full_name='Isis.ControlPointFileEntryV0005.adjustedZ', index=21,
number=22, type=1, cpp_type=5, label=1,
has_default_value=False, default_value=float(0),
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='adjustedCovar', full_name='Isis.ControlPointFileEntryV0005.adjustedCovar', index=22,
number=23, type=1, cpp_type=5, label=3,
has_default_value=False, default_value=[],
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=_b('\020\001'), file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='log', full_name='Isis.ControlPointFileEntryV0005.log', index=23,
number=24, type=11, cpp_type=10, label=3,
has_default_value=False, default_value=[],
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
_descriptor.FieldDescriptor(
name='measures', full_name='Isis.ControlPointFileEntryV0005.measures', index=24,
number=25, type=11, cpp_type=10, label=3,
has_default_value=False, default_value=[],
message_type=None, enum_type=None, containing_type=None,
is_extension=False, extension_scope=None,
serialized_options=None, file=DESCRIPTOR),
],
extensions=[
],
nested_types=[_CONTROLPOINTFILEENTRYV0005_POINTLOGDATA, _CONTROLPOINTFILEENTRYV0005_MEASURE, ],
enum_types=[
_CONTROLPOINTFILEENTRYV0005_POINTTYPE,
_CONTROLPOINTFILEENTRYV0005_APRIORISOURCE,
],
serialized_options=None,
is_extendable=False,
syntax='proto2',
extension_ranges=[],
oneofs=[
],
serialized_start=43,
serialized_end=1837,
)
_CONTROLPOINTFILEENTRYV0005_POINTLOGDATA.containing_type = _CONTROLPOINTFILEENTRYV0005
_CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURELOGDATA.containing_type = _CONTROLPOINTFILEENTRYV0005_MEASURE
_CONTROLPOINTFILEENTRYV0005_MEASURE.fields_by_name['type'].enum_type = _CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURETYPE
_CONTROLPOINTFILEENTRYV0005_MEASURE.fields_by_name['log'].message_type = _CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURELOGDATA
_CONTROLPOINTFILEENTRYV0005_MEASURE.containing_type = _CONTROLPOINTFILEENTRYV0005
_CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURETYPE.containing_type = _CONTROLPOINTFILEENTRYV0005_MEASURE
_CONTROLPOINTFILEENTRYV0005.fields_by_name['type'].enum_type = _CONTROLPOINTFILEENTRYV0005_POINTTYPE
_CONTROLPOINTFILEENTRYV0005.fields_by_name['aprioriSurfPointSource'].enum_type = _CONTROLPOINTFILEENTRYV0005_APRIORISOURCE
_CONTROLPOINTFILEENTRYV0005.fields_by_name['aprioriRadiusSource'].enum_type = _CONTROLPOINTFILEENTRYV0005_APRIORISOURCE
_CONTROLPOINTFILEENTRYV0005.fields_by_name['log'].message_type = _CONTROLPOINTFILEENTRYV0005_POINTLOGDATA
_CONTROLPOINTFILEENTRYV0005.fields_by_name['measures'].message_type = _CONTROLPOINTFILEENTRYV0005_MEASURE
_CONTROLPOINTFILEENTRYV0005_POINTTYPE.containing_type = _CONTROLPOINTFILEENTRYV0005
_CONTROLPOINTFILEENTRYV0005_APRIORISOURCE.containing_type = _CONTROLPOINTFILEENTRYV0005
DESCRIPTOR.message_types_by_name['ControlPointFileEntryV0005'] = _CONTROLPOINTFILEENTRYV0005
_sym_db.RegisterFileDescriptor(DESCRIPTOR)
ControlPointFileEntryV0005 = _reflection.GeneratedProtocolMessageType('ControlPointFileEntryV0005', (_message.Message,), dict(
PointLogData = _reflection.GeneratedProtocolMessageType('PointLogData', (_message.Message,), dict(
DESCRIPTOR = _CONTROLPOINTFILEENTRYV0005_POINTLOGDATA,
__module__ = 'ControlPointFileEntryV0005_pb2'
# @@protoc_insertion_point(class_scope:Isis.ControlPointFileEntryV0005.PointLogData)
))
,
Measure = _reflection.GeneratedProtocolMessageType('Measure', (_message.Message,), dict(
MeasureLogData = _reflection.GeneratedProtocolMessageType('MeasureLogData', (_message.Message,), dict(
DESCRIPTOR = _CONTROLPOINTFILEENTRYV0005_MEASURE_MEASURELOGDATA,
__module__ = 'ControlPointFileEntryV0005_pb2'
# @@protoc_insertion_point(class_scope:Isis.ControlPointFileEntryV0005.Measure.MeasureLogData)
))
,
DESCRIPTOR = _CONTROLPOINTFILEENTRYV0005_MEASURE,
__module__ = 'ControlPointFileEntryV0005_pb2'
# @@protoc_insertion_point(class_scope:Isis.ControlPointFileEntryV0005.Measure)
))
,
DESCRIPTOR = _CONTROLPOINTFILEENTRYV0005,
__module__ = 'ControlPointFileEntryV0005_pb2'
# @@protoc_insertion_point(class_scope:Isis.ControlPointFileEntryV0005)
))
_sym_db.RegisterMessage(ControlPointFileEntryV0005)
_sym_db.RegisterMessage(ControlPointFileEntryV0005.PointLogData)
_sym_db.RegisterMessage(ControlPointFileEntryV0005.Measure)
_sym_db.RegisterMessage(ControlPointFileEntryV0005.Measure.MeasureLogData)
_CONTROLPOINTFILEENTRYV0005.fields_by_name['aprioriCovar']._options = None
_CONTROLPOINTFILEENTRYV0005.fields_by_name['adjustedCovar']._options = None
# @@protoc_insertion_point(module_scope)
plio/io/io_controlnetwork.py
+ 43
− 16
View file @ 9227329f
......@@ -3,8 +3,11 @@ from time import gmtime, strftime
import pandas as pd
import numpy as np
import pvl
import struct
from plio.io import ControlNetFileV0002_pb2 as cnf
from plio.io import ControlNetFileHeaderV0005_pb2 as cnh5
from plio.io import ControlPointFileEntryV0005_pb2 as cnp5
from plio.utils.utils import xstr, find_in_dict
HEADERSTARTBYTE = 65536
......@@ -192,23 +195,47 @@ class IsisStore(object):
self.point_attrs = [i for i in cnf._CONTROLPOINTFILEENTRYV0002.fields_by_name if i != 'measures']
self.measure_attrs = [i for i in cnf._CONTROLPOINTFILEENTRYV0002_MEASURE.fields_by_name]
cols = self.point_attrs + self.measure_attrs
cp = cnf.ControlPointFileEntryV0002()
self._handle.seek(header_start_byte)
pbuf_header = cnf.ControlNetFileHeaderV0002()
pbuf_header.ParseFromString(self._handle.read(header_bytes))
self._handle.seek(point_start_byte)
cp = cnf.ControlPointFileEntryV0002()
pts = []
for s in pbuf_header.pointMessageSizes:
cp.ParseFromString(self._handle.read(s))
pt = [getattr(cp, i) for i in self.point_attrs if i != 'measures']
for measure in cp.measures:
meas = pt + [getattr(measure, j) for j in self.measure_attrs]
pts.append(meas)
elif version == 5:
self.point_attrs = [i for i in cnp5._CONTROLPOINTFILEENTRYV0005.fields_by_name if i != 'measures']
self.measure_attrs = [i for i in cnp5._CONTROLPOINTFILEENTRYV0005_MEASURE.fields_by_name]
cp = cnp5.ControlPointFileEntryV0005()
self._handle.seek(header_start_byte)
pbuf_header = cnh5.ControlNetFileHeaderV0005()
pbuf_header.ParseFromString(self._handle.read(header_bytes))
self._handle.seek(point_start_byte)
cp = cnp5.ControlPointFileEntryV0005()
pts = []
byte_count = 0;
while byte_count < find_in_dict(pvl_header, 'PointsBytes'):
message_size = struct.unpack('I', self._handle.read(4))[0]
cp.ParseFromString(self._handle.read(message_size))
pt = [getattr(cp, i) for i in self.point_attrs if i != 'measures']
for measure in cp.measures:
meas = pt + [getattr(measure, j) for j in self.measure_attrs]
pts.append(meas)
byte_count += 4 + message_size
cp = cnf.ControlPointFileEntryV0002()
self._handle.seek(header_start_byte)
pbuf_header = cnf.ControlNetFileHeaderV0002()
pbuf_header.ParseFromString(self._handle.read(header_bytes))
self._handle.seek(point_start_byte)
cp = cnf.ControlPointFileEntryV0002()
pts = []
for s in pbuf_header.pointMessageSizes:
cp.ParseFromString(self._handle.read(s))
pt = [getattr(cp, i) for i in self.point_attrs if i != 'measures']
for measure in cp.measures:
meas = pt + [getattr(measure, j) for j in self.measure_attrs]
pts.append(meas)
cols = self.point_attrs + self.measure_attrs
df = IsisControlNetwork(pts, columns=cols)
df.header = pvl_header
return df
......
plio/io/tests/test_io_controlnetwork.py
+ 5
− 7
View file @ 9227329f
......@@ -14,15 +14,13 @@ from plio.examples import get_path
import pytest
@pytest.fixture
def apollo_cnet():
return get_path('apollo_out.net')
sys.path.insert(0, os.path.abspath('..'))
def test_cnet_read(apollo_cnet):
df = io_controlnetwork.from_isis(apollo_cnet)
@pytest.mark.parametrize('cnet_file',
(get_path('apollo_out.net'), get_path('apollo_out_v5.net'))
)
def test_cnet_read(cnet_file):
df = io_controlnetwork.from_isis(cnet_file)
assert len(df) == find_in_dict(df.header, 'NumberOfMeasures')
assert isinstance(df, io_controlnetwork.IsisControlNetwork)
assert len(df.groupby('id')) == find_in_dict(df.header, 'NumberOfPoints')
......
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