From ccdc8b723fe921b09ef260a70e73325a60cd755d Mon Sep 17 00:00:00 2001
From: Tyler Thatcher <tdt62@nau.edu>
Date: Tue, 17 Apr 2018 14:38:58 -0700
Subject: [PATCH] Added bin and notebooks directories, also added Socetnet2ISIS
script
---
bin/Socetnet2ISIS.py | 49 +++++
.../Socet2ISIS-checkpoint.ipynb | 6 +
notebooks/Socet2ISIS.ipynb | 173 ++++++++++++++++++
3 files changed, 228 insertions(+)
create mode 100644 bin/Socetnet2ISIS.py
create mode 100644 notebooks/.ipynb_checkpoints/Socet2ISIS-checkpoint.ipynb
create mode 100644 notebooks/Socet2ISIS.ipynb
diff --git a/bin/Socetnet2ISIS.py b/bin/Socetnet2ISIS.py
new file mode 100644
index 0000000..7976517
--- /dev/null
+++ b/bin/Socetnet2ISIS.py
@@ -0,0 +1,49 @@
+import os
+import numpy as np
+
+# Reads a .atf file and outputs all of the
+# .ipf, .gpf, .sup, .prj, and path to locate the
+# .apf file (should be the same as all others)
+def read_atf(atf_file):
+ with open(atf_file) as f:
+
+ files = []
+ ipf = []
+ sup = []
+ files_dict = []
+
+ # Grabs every PRJ, GPF, SUP, and IPF image from the ATF file
+ for line in f:
+ if line[-4:-1] == 'prj' or line[-4:-1] == 'gpf' or line[-4:-1] == 'sup' or line[-4:-1] == 'ipf' or line[-4:-1] == 'atf':
+ files.append(line)
+
+ files = np.array(files)
+
+ # Creates appropriate arrays for certain files in the right format
+ for file in files:
+ file = file.strip()
+ file = file.split(' ')
+
+ # Grabs all the IPF files
+ if file[1].endswith('.ipf'):
+ ipf.append(file[1])
+
+ # Grabs all the SUP files
+ if file[1].endswith('.sup'):
+ sup.append(file[1])
+
+ files_dict.append(file)
+
+ # Creates a dict out of file lists for GPF, PRJ, IPF, and ATF
+ files_dict = (dict(files_dict))
+
+ # Sets the value of IMAGE_IPF to all IPF images
+ files_dict['IMAGE_IPF'] = ipf
+
+ # Sets the value of IMAGE_SUP to all SUP images
+ files_dict['IMAGE_SUP'] = sup
+
+ # Sets the value of PATH to the path of the ATF file
+ files_dict['PATH'] = os.path.dirname(os.path.abspath(atf_file))
+
+ return files_dict
diff --git a/notebooks/.ipynb_checkpoints/Socet2ISIS-checkpoint.ipynb b/notebooks/.ipynb_checkpoints/Socet2ISIS-checkpoint.ipynb
new file mode 100644
index 0000000..2fd6442
--- /dev/null
+++ b/notebooks/.ipynb_checkpoints/Socet2ISIS-checkpoint.ipynb
@@ -0,0 +1,6 @@
+{
+ "cells": [],
+ "metadata": {},
+ "nbformat": 4,
+ "nbformat_minor": 2
+}
diff --git a/notebooks/Socet2ISIS.ipynb b/notebooks/Socet2ISIS.ipynb
new file mode 100644
index 0000000..c513095
--- /dev/null
+++ b/notebooks/Socet2ISIS.ipynb
@@ -0,0 +1,173 @@
+{
+ "cells": [
+ {
+ "cell_type": "code",
+ "execution_count": 67,
+ "metadata": {},
+ "outputs": [
+ {
+ "data": {
+ "text/plain": [
+ "{'ATF_FILE': 'CTX_Athabasca_Middle_step0.atf',\n",
+ " 'GP_FILE': 'CTX_Athabasca_Middle.gpf',\n",
+ " 'IMAGE_IPF': ['P19_008344_1894_XN_09N203W.ipf',\n",
+ " 'P20_008845_1894_XN_09N203W.ipf',\n",
+ " 'P03_002371_1888_XI_08N204W.ipf',\n",
+ " 'P01_001540_1889_XI_08N204W.ipf',\n",
+ " 'P01_001606_1897_XI_09N203W.ipf',\n",
+ " 'P03_002226_1895_XI_09N203W.ipf'],\n",
+ " 'IMAGE_SUP': ['P19_008344_1894_XN_09N203W.sup',\n",
+ " 'P20_008845_1894_XN_09N203W.sup',\n",
+ " 'P03_002371_1888_XI_08N204W.sup',\n",
+ " 'P01_001540_1889_XI_08N204W.sup',\n",
+ " 'P01_001606_1897_XI_09N203W.sup',\n",
+ " 'P03_002226_1895_XI_09N203W.sup'],\n",
+ " 'PATH': '/home/tthatcher/Desktop/Projects/Plio/plio/notebooks',\n",
+ " 'PROJECT': 'D:\\\\data\\\\CTX_Athabasca_Middle.prj'}"
+ ]
+ },
+ "execution_count": 67,
+ "metadata": {},
+ "output_type": "execute_result"
+ }
+ ],
+ "source": [
+ "import os\n",
+ "import numpy as np\n",
+ "\n",
+ "# Reads a .atf file and outputs all of the \n",
+ "# .ipf, .gpf, .sup, .prj, and path to locate the \n",
+ "# .apf file (should be the same as all others) \n",
+ "def read_atf(atf_file):\n",
+ " with open(atf_file) as f:\n",
+ "\n",
+ " files = []\n",
+ " ipf = []\n",
+ " sup = []\n",
+ " files_dict = []\n",
+ " \n",
+ " # Grabs every PRJ, GPF, SUP, and IPF image from the ATF file\n",
+ " for line in f:\n",
+ " if line[-4:-1] == 'prj' or line[-4:-1] == 'gpf' or line[-4:-1] == 'sup' or line[-4:-1] == 'ipf' or line[-4:-1] == 'atf':\n",
+ " files.append(line)\n",
+ " \n",
+ " files = np.array(files)\n",
+ " \n",
+ " # Creates appropriate arrays for certain files in the right format\n",
+ " for file in files:\n",
+ " file = file.strip()\n",
+ " file = file.split(' ')\n",
+ "\n",
+ " # Grabs all the IPF files\n",
+ " if file[1].endswith('.ipf'):\n",
+ " ipf.append(file[1])\n",
+ "\n",
+ " # Grabs all the SUP files\n",
+ " if file[1].endswith('.sup'):\n",
+ " sup.append(file[1])\n",
+ "\n",
+ " files_dict.append(file)\n",
+ "\n",
+ " # Creates a dict out of file lists for GPF, PRJ, IPF, and ATF\n",
+ " files_dict = (dict(files_dict))\n",
+ " \n",
+ " # Sets the value of IMAGE_IPF to all IPF images\n",
+ " files_dict['IMAGE_IPF'] = ipf\n",
+ " \n",
+ " # Sets the value of IMAGE_SUP to all SUP images\n",
+ " files_dict['IMAGE_SUP'] = sup\n",
+ " \n",
+ " # Sets the value of PATH to the path of the ATF file\n",
+ " files_dict['PATH'] = os.path.dirname(os.path.abspath(atf_file))\n",
+ " \n",
+ " return files_dict\n",
+ " \n",
+ "read_atf('CTX_Athabasca_Middle_step0.atf')"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ }
+ ],
+ "metadata": {
+ "kernelspec": {
+ "display_name": "Python 3",
+ "language": "python",
+ "name": "python3"
+ },
+ "language_info": {
+ "codemirror_mode": {
+ "name": "ipython",
+ "version": 3
+ },
+ "file_extension": ".py",
+ "mimetype": "text/x-python",
+ "name": "python",
+ "nbconvert_exporter": "python",
+ "pygments_lexer": "ipython3",
+ "version": "3.6.4"
+ }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}
--
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