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Created with Raphaël 2.2.019Nov181514131187631Oct29282524222118158726Sep242320131211543221Aug842129Jul28252321191716151211109827Jun262524211916141265331May29282726242221171615141312111097432130Apr292624231917125428Mar2625232221201918151312118765429Feb282723222120161413129765229Jan262524191817161514121110986542131Dec2928272625242120181615add AC_SUBST entries for BLASfix autoconf to add explicit blas libs (needed for iterative refinement and lapacke)add iterative refinement to one compile check and to the running check of gitlab-runneradd autoconf support for iterative refinementmove Giovanni's revised pycompare_mod -> pycompareadd the new version of pycompare modified by Giovanni to enable comparing two C++ code outputsAdd inclu_subs to Makefile and C++ porting of CNF()first working implementation of iterative refinement to assess and improve numerical stability of numerical inversion of amAdd C++ porting of INDME()Ignore INSERTION lines also in pycompare ffile contentsPrepare C++ implementation of INDME functionUse built-in complex absolute function in cbf()Add C++ porting of INCMS and EXMACreate inclu_subs library and port INSTR subroutine to C++fix compilation of blas-based iterative refinementMerge branch 'master' into magma_refinementiterative refinement now checks for convergence only on first wavelength, afterwards it assumes a fixed number of refinement iterationsMerge branch 'inclusions' into 'master'Merge branch 'master' into inclusions to use updated CI pipelineFix wavelength calculation in FORTRAN implementation of INCLUFirst implementation of iterative refinement of matrix inversion, in magma and lapack.Remove commented deprecated C1, C1_AddOns and C4 classesFix access to VJ variable in GHIT (untested)Create a memory sanity check stageCreate a memory sanity test suite for ParticleDescriptorFirst attempt at implementing iterative refinement of inverse matrixMerge branch 'magma_refinement' into 'master'ifort is not available any more in Intel compiler, remove its test from pipelineMake INCLUSION a minimal executable to test memory structuresupdate paths for Intel compilersComment out legacy common classesFix wrong MPI_COMM_WORLD specificationsUse ParticleDescriptor in CLUSTERFix leak on dwork GPU allocationMerge branch 'container_with_valgrind' into 'master'- add valgrind to the docker image used by gitlab-runner for the pipelineUse ParticleDescriptor in SPHEREAdd inclusion particle description and move all memory-freeing code in base-class destroyerRemove unused index variableAdd ParticleDescriptorCluster derived class