diff --git a/jacobi/serial/not_opt/script/run_JUWELS.sh b/jacobi/serial/not_opt/script/run_JUWELS.sh deleted file mode 100755 index b3908e9bb94c04dc637ca947c1958bda95e8c538..0000000000000000000000000000000000000000 --- a/jacobi/serial/not_opt/script/run_JUWELS.sh +++ /dev/null @@ -1,95 +0,0 @@ -#!/bin/bash -x - -######################### RESOURSE ALLOCATION ##################################### -# ACCOUNT = prpb93 -# NODES = 2 (2 nodes) -# PARTITION = batch (use Cluster Module) -# ERROR = Nbody-err.%j (error handle) -# TIME = 00:15:00 (enough for tests) -# EXCLUSIVE = node should not be shared with other jobs - -#SBATCH --account=prpb93 -#SBATCH --nodes=1 -#SBATCH --partition=batch -#SBATCH --error=Nbody-err.%j -#SBATCH --time=00:03:00 -#SBATCH --job-name="Nbody" -#SBATCH --exclusive -################################################################################### - -################################## MODULES ######################################## -# module purge -module purge -# load GCC -module load GCC/9.3.0 -# load OpenMPI -module load OpenMPI -################################################################################### - -# compile the application -# select flags inside the Makefile (parent directory) -cd .. && make mpi_omp_step_profiling -f Makefile - -if [[ "$?" != "0" ]] -then - echo "Cannot compile the application ...aborting..." - exit 1 -fi - -# the executable -EXEC=$(find . -name *$(hostname)* -executable -type f) -if [[ "$?" != "0" ]] -then - echo "Cannot find the executable ...aborting..." - exit 2 -fi - -# return to ./script and source input parameters and function -cd - && source input_parameters && source write_paramfile.sh - -# loop over particles -for PART in "${N[@]}" -do - # loop over MPI tasks - for TASK in "${MPI[@]}" - do - # loop over OMP threads - for THR in "${THREADS[@]}" - do - # write the paramfile - write_paramfile ${TEMPLATE} ${PARAMFILE} \ - ${DELETE_OUTPUT_FILES} ${OUTPUTDIR} \ - ${THR} ${PART} - - # check the status - if [[ "$?" != "0" ]] - then - echo "Error while writing ${PARAMFILE} ...aborting..." - exit 3 - fi - - # move the paramfile and move to the parent directory where the executable resides - mv ${PARAMFILE} ../ && cd .. - - # run the application - srun --ntasks ${TASK} ${EXEC} ${PARAMFILE} >& $SLURM_JOB_ID.log - - # check exit status - if [[ "$?" != "0" ]] - then - echo "####################################################################" - echo "ERROR while running the app using: ${TASK} MPI tasks and ${GPU} GPUs" - echo "####################################################################" - fi - - # delete the paramfile and return to the previous directory - rm -f ${PARAMFILE} && cd - - done # loop over THR - done # loop over TASKS -done # looop over particles - -# make clean -cd .. && make clean - -# Everything is OK! -exit 0