From aa3aa31b903ede7651ddead23b4816e088a5a394 Mon Sep 17 00:00:00 2001
From: Sonia Zorba <sonia.zorba@inaf.it>
Date: Wed, 21 Aug 2019 17:18:46 +0200
Subject: [PATCH] Started Dockerization

---
 Dockerfile                               | 52 ++++++++++++++++++++++++
 classes/datalayer/mysql/BaseMySQLDAO.php |  2 +-
 classes/datalayer/mysql/MySQLUserDAO.php |  2 +-
 docker/db/1-user.sql                     |  5 +++
 docker/db/Dockerfile                     |  9 ++++
 docker/db/event.cnf                      |  2 +
 docker/rap.conf                          |  3 ++
 7 files changed, 73 insertions(+), 2 deletions(-)
 create mode 100644 Dockerfile
 create mode 100644 docker/db/1-user.sql
 create mode 100644 docker/db/Dockerfile
 create mode 100644 docker/db/event.cnf
 create mode 100644 docker/rap.conf

diff --git a/Dockerfile b/Dockerfile
new file mode 100644
index 0000000..6de6318
--- /dev/null
+++ b/Dockerfile
@@ -0,0 +1,52 @@
+FROM ubuntu:18.10
+
+# To fix "configuring tzdata" interactive input during apt install
+ENV DEBIAN_FRONTEND=noninteractive
+
+RUN apt-get update && \
+    apt-get install -yq --no-install-recommends \
+    apache2 \
+    libapache2-mod-php7.2 \
+    php7.2-xml \
+    php7.2-mbstring \
+    php-mysql \
+    php-curl \
+    libapache2-mod-shib2 \
+    make \
+    wget \
+    ca-certificates \
+    vim
+
+# Copying Shibboleth SP configuration
+COPY docker/shibboleth2.xml /etc/shibboleth/
+    
+# Installing Embedded Discovery Service
+WORKDIR /usr/local/src
+
+RUN wget https://shibboleth.net/downloads/embedded-discovery-service/1.2.1/shibboleth-embedded-ds-1.2.1.tar.gz -O shibboleth-eds.tar.gz
+RUN tar xzf shibboleth-eds.tar.gz
+
+WORKDIR shibboleth-embedded-ds-1.2.1
+RUN make install
+
+RUN mv /etc/shibboleth-ds/shibboleth-ds.conf /etc/apache2/conf-available/shibboleth-ds.conf
+RUN sed -i 's/Allow from All/Require all granted/g' /etc/apache2/conf-available/shibboleth-ds.conf
+RUN a2enconf shibboleth-ds.conf
+
+# Adding RAP Apache configuration
+COPY docker/rap.conf /etc/apache2/conf-available/
+RUN a2enconf rap.conf
+
+# Enable mod_rewrite (for Flight framework)
+RUN a2enmod rewrite
+
+# Copying RAP php files
+WORKDIR /var/www/html
+COPY . rap-ia2
+
+WORKDIR /var/www/html/rap-ia2
+RUN mkdir -p logs
+RUN chown -R www-data logs
+
+# Starting Apache
+CMD apachectl -D FOREGROUND
diff --git a/classes/datalayer/mysql/BaseMySQLDAO.php b/classes/datalayer/mysql/BaseMySQLDAO.php
index 3741c95..7798f38 100644
--- a/classes/datalayer/mysql/BaseMySQLDAO.php
+++ b/classes/datalayer/mysql/BaseMySQLDAO.php
@@ -17,7 +17,7 @@ abstract class BaseMySQLDAO {
      */
     public function getDBHandler(): PDO {
         $config = $this->locator->config->databaseConfig;
-        $connectionString = "mysql:host=" . $config->hostname . ";dbname=" . $config->dbname;
+        $connectionString = "mysql:host=" . $config->hostname . ";port=" . $config->port . ";dbname=" . $config->dbname;
         $dbh = new PDO($connectionString, $config->username, $config->password);
         // For transaction errors (see https://stackoverflow.com/a/9659366/771431)
         $dbh->setAttribute(PDO::ATTR_ERRMODE, PDO::ERRMODE_EXCEPTION);
diff --git a/classes/datalayer/mysql/MySQLUserDAO.php b/classes/datalayer/mysql/MySQLUserDAO.php
index 3b9768e..cc1adaa 100644
--- a/classes/datalayer/mysql/MySQLUserDAO.php
+++ b/classes/datalayer/mysql/MySQLUserDAO.php
@@ -234,7 +234,7 @@ class MySQLUserDAO extends BaseMySQLDAO implements UserDAO {
 
             array_push($user->identities, $identity);
         }
-        
+
         $users = [];
         foreach ($userMap as $userId => $user) {
             array_push($users, $user);
diff --git a/docker/db/1-user.sql b/docker/db/1-user.sql
new file mode 100644
index 0000000..4e6eaff
--- /dev/null
+++ b/docker/db/1-user.sql
@@ -0,0 +1,5 @@
+CREATE DATABASE rap;
+CREATE USER rap@'%' IDENTIFIED BY 'rap123';
+GRANT ALL PRIVILEGES ON rap.* TO rap@'%';
+
+USE rap;
diff --git a/docker/db/Dockerfile b/docker/db/Dockerfile
new file mode 100644
index 0000000..6fe9ed1
--- /dev/null
+++ b/docker/db/Dockerfile
@@ -0,0 +1,9 @@
+FROM mariadb:10.4
+
+ENV MYSQL_ROOT_PASSWORD=root
+
+ADD docker/db/event.cnf /etc/mysql/conf.d/
+ADD docker/db/1-user.sql /docker-entrypoint-initdb.d/
+ADD sql/setup-database.sql /docker-entrypoint-initdb.d/
+
+RUN sed -i.old '1s;^;USE rap\;\n;' /docker-entrypoint-initdb.d/setup-database.sql
diff --git a/docker/db/event.cnf b/docker/db/event.cnf
new file mode 100644
index 0000000..49fd848
--- /dev/null
+++ b/docker/db/event.cnf
@@ -0,0 +1,2 @@
+[mysqld]
+event_scheduler=1 
diff --git a/docker/rap.conf b/docker/rap.conf
new file mode 100644
index 0000000..dc0c73a
--- /dev/null
+++ b/docker/rap.conf
@@ -0,0 +1,3 @@
+<Directory /var/www/html/rap-ia2/>
+    AllowOverride All
+</Directory>
-- 
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