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Unverified Commit 36051ead authored by kledmundson's avatar kledmundson Committed by GitHub
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The cnetedit application has been refactored to be callable; Makefile tests... 

The cnetedit application has been refactored to be callable; Makefile tests have been removed and replaced by gtests (#5348)

* The cnetedit application has been refactored to be callable; Makefile tests have been migrated to gtest format. Addresses #5346.

* Removed extraneous variables from FunctionalTestsCnetedit.cpp. Addresses #5346.

* Updated gtests; replace cubes with labels. Addresses #5346.

* Per review cleaned up sloppy spacing; made global variables static in cnetedit.cpp to avoid issues when linking libisis. Addresses #5346.
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CHANGELOG.md
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− 1
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......@@ -36,7 +36,8 @@ release.
## [Unreleased]
### Changed
- Cnetedit has been refactored to be callable; old Makefile tests have been removed and replaced by gtests. Issue: [#5322](https://github.com/USGS-Astrogeology/ISIS3/issues/5322),
- Cnetedit has been refactored to be callable; old Makefile tests have been removed and replaced by gtests. Issue: [#5346](https://github.com/USGS-Astrogeology/ISIS3/issues/5346),
- Cnetdiff has been refactored to be callable; old Makefile tests have been removed and replaced by gtests. Issue: [#5322](https://github.com/USGS-Astrogeology/ISIS3/issues/5322),
- Removed the `.py` extention from the _isisdataeval_ tool `isisdata_mockup` for consistency and install it in $ISISROOT/bin; added the `--tojson` and `--hasher` option to _isisdata_mockup_ tool improve utility; updated the tool `README.md` documentation to reflect this change, removed help output and trimmed example results; fixed paths to test data in `make_isisdata_mockup.sh`. [#5163](https://github.com/DOI-USGS/ISIS3/pull/5163)
- Significantly refactored FASTGEOM processing in <i>findfeatures</i> to accommodate stability and functionality. The scope of the algorithm was taken out of the ImageSource class and isolated to support this feature. [#4772](https://github.com/DOI-USGS/ISIS3/issues/4772)
- Report better information regarding the behavior of <i>findfeatures</i>, FASTGEOM algorithms, and creation of the output network. [#4772](https://github.com/DOI-USGS/ISIS3/issues/4772)
......
isis/src/control/apps/cnetedit/cnetedit.cpp 0 → 100644
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isis/src/control/apps/cnetedit/cnetedit.h 0 → 100644
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/** This is free and unencumbered software released into the public domain.
The authors of ISIS do not claim copyright on the contents of this file.
For more details about the LICENSE terms and the AUTHORS, you will
find files of those names at the top level of this repository. **/
/* SPDX-License-Identifier: CC0-1.0 */
#ifndef cnetedit_h
#define cnetedit_h
#include "UserInterface.h"
namespace Isis{
class ControlNet;
class ControlPointList;
class SerialNumberList;
extern Pvl cnetedit(UserInterface &ui);
extern Pvl cnetedit(ControlNet &cnet, UserInterface &ui,
ControlPointList *cpList=nullptr,
SerialNumberList *cubeSnl=nullptr,
QMap< QString, QSet<QString> * > *editMeasuresList=nullptr,
Pvl *defFile=nullptr,
SerialNumberList *validationSnl=nullptr);
}
#endif
isis/src/control/apps/cnetedit/main.cpp
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isis/src/control/apps/cnetedit/tsts/Makefile deleted 100644 → 0
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BLANKS = "%-6s"
LENGTH = "%-40s"
include $(ISISROOT)/make/isismake.tststree
isis/src/control/apps/cnetedit/tsts/checkValid/Makefile deleted 100644 → 0
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
# normal test
$(LS) $(INPUT)/*.cub > $(OUTPUT)/list.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
ONET=$(OUTPUT)/cnet.net \
LOG=$(OUTPUT)/log.txt \
CHECKVALID=yes \
FROMLIST=$(OUTPUT)/list.lis \
DEFFILE=$(INPUT)/deffile.def \
RETAIN_REFERENCE=yes > /dev/null;
# test with IGNOREALL=true
# $(LS) $(INPUT)/*.cub > $(OUTPUT)/list.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
ONET=$(OUTPUT)/cnet2.net \
LOG=$(OUTPUT)/log2.txt \
CHECKVALID=yes \
IGNOREALL=true \
FROMLIST=$(OUTPUT)/list.lis \
DEFFILE=$(INPUT)/deffile.def > /dev/null;
# Cleanup
$(RM) $(OUTPUT)/list.lis;
isis/src/control/apps/cnetedit/tsts/default/Makefile deleted 100644 → 0
+ 0
− 6
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
$(APPNAME) CNET=$(INPUT)/cnet.net ONET=$(OUTPUT)/cnet.net > /dev/null;
isis/src/control/apps/cnetedit/tsts/editLock/Makefile deleted 100644 → 0
+ 0
− 22
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
$(LS) $(INPUT)/*.cub > $(OUTPUT)/list.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
LOG=$(OUTPUT)/locked.txt \
CUBELIST=$(OUTPUT)/list.lis \
POINTLIST=$(INPUT)/points.lis \
IGNORE=no DELETE=no LOCK=yes \
ONET=$(OUTPUT)/locked.net > /dev/null;
$(APPNAME) CNET=$(INPUT)/cnet.net \
LOG=$(OUTPUT)/unlocked.txt \
CUBELIST=$(OUTPUT)/list.lis \
POINTLIST=$(INPUT)/points.lis \
UNLOCK=yes IGNORE=no DELETE=no \
ONET=$(OUTPUT)/unlocked.net > /dev/null;
$(RM) $(OUTPUT)/list.lis;
isis/src/control/apps/cnetedit/tsts/errors/Makefile deleted 100644 → 0
+ 0
− 19
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
# Test with a non-existant file
echo -e "Error Test: Non-existant file" > $(OUTPUT)/error_temp.txt;
if [[ `$(APPNAME) CNET=$(INPUT)/cnet.net \
ONET=$(OUTPUT)/cnet.net \
2>> $(OUTPUT)/error_temp.txt \
> /dev/null` ]]; \
then \
true; \
fi;
$(SED) 's+\[/.*/input/+\[input/+' $(OUTPUT)/error_temp.txt > $(OUTPUT)/error.txt;
# Cleanup
$(RM) $(OUTPUT)/error_temp.txt;
isis/src/control/apps/cnetedit/tsts/ignore/Makefile deleted 100644 → 0
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− 15
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
$(LS) $(INPUT)/*.cub > $(OUTPUT)/list.lis;
$(CAT) $(INPUT)/measurelist.txt | sed 's#X#$(INPUT)#' \
> $(OUTPUT)/measurelist.txt;
$(APPNAME) CNET=$(INPUT)/cnet.net \
CUBELIST=$(OUTPUT)/list.lis \
MEASURELIST=$(OUTPUT)/measurelist.txt \
ONET=$(OUTPUT)/cnet.net DELETE=no \
IGNOREALL=yes \
log=$(OUTPUT)/log.txt > /dev/null;
$(RM) $(OUTPUT)/list.lis $(OUTPUT)/measurelist.txt;
isis/src/control/apps/cnetedit/tsts/ignoreMeasuresPoints/Makefile deleted 100644 → 0
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− 12
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
$(LS) $(INPUT)/*.cub > $(OUTPUT)/list.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
LOG=$(OUTPUT)/log.txt \
CUBELIST=$(OUTPUT)/list.lis \
POINTLIST=$(INPUT)/points.lis \
ONET=$(OUTPUT)/cnet.net > /dev/null;
$(RM) $(OUTPUT)/list.lis;
isis/src/control/apps/cnetedit/tsts/ignorePoints/Makefile deleted 100644 → 0
+ 0
− 15
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
# original test
$(APPNAME) CNET=$(INPUT)/cnet.net \
POINTLIST=$(INPUT)/points.lis \
ONET=$(OUTPUT)/cnet.net > /dev/null;
# test IGNOREALL=true with ignored input measures / points
$(APPNAME) CNET=$(INPUT)/cnet.net \
POINTLIST=$(INPUT)/points.lis \
IGNOREALL = true \
ONET=$(OUTPUT)/cnet2.net > /dev/null;
isis/src/control/apps/cnetedit/tsts/measurelist/Makefile deleted 100644 → 0
+ 0
− 39
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
# general test
$(CAT) $(INPUT)/bad_measures.lis | $(SED) "s#,#,$(INPUT)/#" \
> $(OUTPUT)/list.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
LOG=$(OUTPUT)/log.txt \
MEASURELIST=$(OUTPUT)/list.lis \
DELETE=no \
ONET=$(OUTPUT)/cnet.net > /dev/null;
# test with IGNOREALL = true, DELETE=no measure that is a reference for a non-ignored point
$(CAT) $(INPUT)/bad_measures2.lis | $(SED) "s#,#,$(INPUT)/#" \
> $(OUTPUT)/list2.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
LOG=$(OUTPUT)/log2.txt \
MEASURELIST=$(OUTPUT)/list2.lis \
IGNOREALL=true \
DELETE=no \
ONET=$(OUTPUT)/cnet2.net > /dev/null;
# test with DELETE=yes
$(CAT) $(INPUT)/bad_measures.lis | $(SED) "s#,#,$(INPUT)/#" \
> $(OUTPUT)/list.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
LOG=$(OUTPUT)/log3.txt \
MEASURELIST=$(OUTPUT)/list.lis \
ONET=$(OUTPUT)/cnet3.net > /dev/null;
# Cleanup
$(RM) $(OUTPUT)/list.lis;
$(RM) $(OUTPUT)/list2.lis;
isis/src/control/apps/cnetedit/tsts/noDelete/Makefile deleted 100644 → 0
+ 0
− 13
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APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
$(LS) $(INPUT)/*.cub > $(OUTPUT)/list.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
LOG=$(OUTPUT)/log.txt \
CUBELIST=$(OUTPUT)/list.lis \
POINTLIST=$(INPUT)/points.lis \
DELETE = false \
ONET=$(OUTPUT)/cnet2.net > /dev/null;
$(RM) $(OUTPUT)/list.lis;
isis/src/control/apps/cnetedit/tsts/preservePoints/Makefile deleted 100644 → 0
+ 0
− 14
View file @ e7abbc51
APPNAME = cnetedit
include $(ISISROOT)/make/isismake.tsts
commands:
$(LS) $(INPUT)/*.cub > $(OUTPUT)/list.lis;
$(APPNAME) CNET=$(INPUT)/cnet.net \
LOG=$(OUTPUT)/log.txt \
CUBELIST=$(OUTPUT)/list.lis \
POINTLIST=$(INPUT)/points.lis \
DELETE = true \
PRESERVE = true \
ONET=$(OUTPUT)/cnet2.net > /dev/null;
$(RM) $(OUTPUT)/list.lis;
isis/tests/FunctionalTestsCnetedit.cpp 0 → 100644
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isis/tests/data/cnetedit/I07873009RDR.dstr.cub.label.pvl 0 → 100644
+ 387
− 0
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Object = IsisCube
Object = Core
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Format = Tile
TileSamples = 320
TileLines = 472
Group = Dimensions
Samples = 320
Lines = 17936
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Group = Pixels
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ByteOrder = Lsb
Base = 0.0
Multiplier = 1.0
End_Group
End_Object
Group = Instrument
SpacecraftName = MARS_ODYSSEY
InstrumentId = THEMIS_IR
TargetName = MARS
MissionPhaseName = MAPPING
StartTime = 2003-09-23T15:42:25.400
StopTime = 2003-09-23T15:52:23.262
SpacecraftClockCount = 748799078.000
GainNumber = 16
OffsetNumber = 2
MissingScanLines = 0
TimeDelayIntegration = ENABLED
SpacecraftClockOffset = 0.0 <seconds>
End_Group
Group = Archive
DataSetId = ODY-M-THM-3-IRRDR-V1.0
ProducerId = ODY_THM_TEAM
ProductId = I07873009RDR
ProductCreationTime = 2004-10-14T00:21:58
ProductVersionId = 1.1
OrbitNumber = 07873
FlightSoftwareVersionId = 1.00
CommandSequenceNumber = 7873
Description = "No Description Given"
End_Group
Group = BandBin
OriginalBand = 2
Center = 12.57
Width = 0.81
FilterNumber = 9
End_Group
Group = Kernels
NaifFrameCode = -53031
LeapSecond = $base/kernels/lsk/naif0009.tls
TargetAttitudeShape = $base/kernels/pck/pck00009.tpc
TargetPosition = (Table, $base/kernels/spk/de405.bsp)
InstrumentPointing = (Table, $odyssey/kernels/ck/m01_sc_map7.bc,
$odyssey/kernels/fk/m01_v29.tf)
Instrument = Null
SpacecraftClock = $odyssey/kernels/sclk/ORB1_SCLKSCET.00184.tsc
InstrumentPosition = (Table, $odyssey/kernels/spk/m01_map7.bsp)
InstrumentAddendum = $odyssey/kernels/iak/themisAddendum003.ti
ShapeModel = $base/dems/molaMarsPlanetaryRadius0005.cub
InstrumentPositionQuality = Reconstructed
InstrumentPointingQuality = Reconstructed
CameraVersion = 2
End_Group
End_Object
Object = Label
Bytes = 65536
End_Object
Object = Table
Name = InstrumentPointing
StartByte = 23023617
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ByteOrder = Lsb
TimeDependentFrames = (-53000, 16, 1)
ConstantFrames = (-53031, -53030, -53000)
ConstantRotation = (0.0013835021734055, 0.011529976186854,
0.99993257051207, 0.28811330695433, 0.95752799265849,
-0.011439651709814, -0.95759532594806,
0.28810970640458, -0.0019971975093594)
CkTableStartTime = 117603812.11191
CkTableEndTime = 117604414.30884
CkTableOriginalSize = 17937
Description = "Created by spiceinit"
Kernels = ($odyssey/kernels/ck/m01_sc_map7.bc,
$odyssey/kernels/fk/m01_v29.tf)
Group = Field
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Object = Table
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StartByte = 23032577
Bytes = 4200
Records = 75
ByteOrder = Lsb
CacheType = HermiteSpline
SpkTableStartTime = 117603812.11191
SpkTableEndTime = 117604414.30884
SpkTableOriginalSize = 17937.0
Description = "Created by spiceinit"
Kernels = $odyssey/kernels/spk/m01_map7.bsp
Group = Field
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Name = BodyRotation
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Records = 2
ByteOrder = Lsb
TimeDependentFrames = (10014, 1)
CkTableStartTime = 117603812.11191
CkTableEndTime = 117604414.30884
CkTableOriginalSize = 2
Description = "Created by spiceinit"
Kernels = ($base/kernels/spk/de405.bsp,
$base/kernels/pck/pck00009.tpc)
SolarLongitude = 266.33576028989
Group = Field
Name = J2000Q0
Type = Double
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End_Group
Group = Field
Name = J2000Q1
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Size = 1
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Group = Field
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Group = Field
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Group = Field
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Object = Table
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StartByte = 23036905
Bytes = 112
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ByteOrder = Lsb
CacheType = Linear
SpkTableStartTime = 117603812.11191
SpkTableEndTime = 117604414.30884
SpkTableOriginalSize = 2.0
Description = "Created by spiceinit"
Kernels = $base/kernels/spk/de405.bsp
Group = Field
Name = J2000X
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Name = Name
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Size = 20
End_Group
Group = Field
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End_Group
Group = Field
Name = Maximum
Type = Double
Size = 1
End_Group
Group = Field
Name = Average
Type = Double
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End_Group
Group = Field
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Bytes = 4311
End_Object
Object = NaifKeywords
BODY499_RADII = (3396.19, 3396.19, 3376.2)
BODY_FRAME_CODE = 10014
CLOCK_ET_-53_748799078.000_COMPUTED = b4105486f7099c41
INS-53031_TRANSX = (0.0, 0.05, 0.0)
INS-53031_TRANSY = (0.0, 0.0, 0.05)
INS-53031_ITRANSS = (0.0, 20.0, 0.0)
INS-53031_ITRANSL = (0.0, 0.0, 20.0)
End_Object
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End_Object
Object = OriginalLabel
Name = IsisCube
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End_Object
End
isis/tests/data/cnetedit/I09477002RDR.dstr.cub.label.pvl 0 → 100644
+ 387
− 0
View file @ 36051ead
Object = IsisCube
Object = Core
StartByte = 65537
Format = Tile
TileSamples = 320
TileLines = 128
Group = Dimensions
Samples = 320
Lines = 10768
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End_Group
Group = Pixels
Type = Real
ByteOrder = Lsb
Base = 0.0
Multiplier = 1.0
End_Group
End_Object
Group = Instrument
SpacecraftName = MARS_ODYSSEY
InstrumentId = THEMIS_IR
TargetName = MARS
MissionPhaseName = MAPPING
StartTime = 2004-02-02T16:17:44.937
StopTime = 2004-02-02T16:23:43.874
SpacecraftClockCount = 760206015.230
GainNumber = 16
OffsetNumber = 2
MissingScanLines = 0
TimeDelayIntegration = ENABLED
SpacecraftClockOffset = 0.0 <seconds>
End_Group
Group = Archive
DataSetId = ODY-M-THM-3-IRRDR-V1.0
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ProductVersionId = 1.1
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FlightSoftwareVersionId = 1.00
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Description = "No Description Given"
End_Group
Group = BandBin
OriginalBand = 9
Center = 12.57
Width = 0.81
FilterNumber = 9
End_Group
Group = Kernels
NaifFrameCode = -53031
LeapSecond = $base/kernels/lsk/naif0009.tls
TargetAttitudeShape = $base/kernels/pck/pck00009.tpc
TargetPosition = (Table, $base/kernels/spk/de405.bsp)
InstrumentPointing = (Table, $odyssey/kernels/ck/m01_sc_map9.bc,
$odyssey/kernels/fk/m01_v29.tf)
Instrument = Null
SpacecraftClock = $odyssey/kernels/sclk/ORB1_SCLKSCET.00184.tsc
InstrumentPosition = (Table, $odyssey/kernels/spk/m01_map9.bsp)
InstrumentAddendum = $odyssey/kernels/iak/themisAddendum003.ti
ShapeModel = $base/dems/molaMarsPlanetaryRadius0005.cub
InstrumentPositionQuality = Reconstructed
InstrumentPointingQuality = Reconstructed
CameraVersion = 2
End_Group
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Bytes = 65536
End_Object
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Name = InstrumentPointing
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Description = "Created by spiceinit"
Kernels = ($odyssey/kernels/ck/m01_sc_map9.bc,
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SpkTableEndTime = 129011095.24634
SpkTableOriginalSize = 10769.0
Description = "Created by spiceinit"
Kernels = $odyssey/kernels/spk/m01_map9.bsp
Group = Field
Name = J2000X
Type = Double
Size = 1
End_Group
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Name = J2000Y
Type = Double
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End_Group
Group = Field
Name = J2000Z
Type = Double
Size = 1
End_Group
Group = Field
Name = J2000XV
Type = Double
Size = 1
End_Group
Group = Field
Name = J2000YV
Type = Double
Size = 1
End_Group
Group = Field
Name = J2000ZV
Type = Double
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Name = ET
Type = Double
Size = 1
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End_Object
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Name = BodyRotation
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ByteOrder = Lsb
TimeDependentFrames = (10014, 1)
CkTableStartTime = 129010729.38783
CkTableEndTime = 129011095.24634
CkTableOriginalSize = 2
Description = "Created by spiceinit"
Kernels = ($base/kernels/spk/de405.bsp,
$base/kernels/pck/pck00009.tpc)
SolarLongitude = 343.59609359065
Group = Field
Name = J2000Q0
Type = Double
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