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Commit 7aac3c31 authored by thareUSGS's avatar thareUSGS
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save_gpf seems to be working well. Note sure the test is ready though. It is... 

save_gpf seems to be working well. Note sure the test is ready though. It is there but uncertain if filecmp.cmp with shallow=True will allow it to pass since they are not exactly the same (e.g. number of decimal places). Also cat file be written too?
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plio/examples/SocetGXP/out_InSightE08_XW.gpf 0 → 100644
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GROUND POINT FILE
160
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plio/io/.ipynb_checkpoints/Untitled-checkpoint.ipynb 0 → 100644
+ 6
− 0
View file @ 7aac3c31
{
"cells": [],
"metadata": {},
"nbformat": 4,
"nbformat_minor": 2
}
plio/io/io_gpf.py
+ 43
− 1
View file @ 7aac3c31
import math
import numpy as np import numpy as np
import pandas as pd import pandas as pd
...@@ -44,3 +43,46 @@ def read_gpf(input_data): ...@@ -44,3 +43,46 @@ def read_gpf(input_data):
assert int(cnt) == len(df) assert int(cnt) == len(df)
return df return df
def save_gpf(df, output_file):
"""
Write a socet gpf file from a gpf-defined pandas dataframe
Parameters
----------
df : pd.DataFrame
Pandas DataFrame
output_file : str
path to the output data file
Returns
-------
int : success value
0 = success, 1 = errors
"""
# Check that file can be opened
try:
outGPF = open(output_file, 'w', newline='\r\n')
except:
print ('Unable to open output gpf file: {0}'.format(output_file))
return 1
#grab number of rows in pandas dataframe
numpts = len(df)
#Output gpf header
outGPF.write('GROUND POINT FILE\n')
outGPF.write('{0}\n'.format(numpts))
outGPF.write('point_id,stat,known,lat_Y_North,long_X_East,ht,sig(3),res(3)\n')
for index,row in df.iterrows():
#Output coordinates to gpf file
outGPF.write('{0} {1} {2}\n'.format(row['point_id'], row['stat'], row['known']))
outGPF.write('{0} {1} {2}\n'.format(row['lat_y_North'], row['long_X_East'], row['ht']))
outGPF.write('{0} {1} {2}\n'.format(row['sigma0'], row['sigma1'], row['sigma2']))
outGPF.write('{0} {1} {2}\n\n'.format(row['res0'], row['res1'], row['res2']))
outGPF.close()
return 0
plio/io/tests/test_gpf.py
+ 13
− 0
View file @ 7aac3c31
...@@ -3,14 +3,20 @@ import pandas as pd ...@@ -3,14 +3,20 @@ import pandas as pd
from pandas.util.testing import assert_frame_equal from pandas.util.testing import assert_frame_equal
from plio.io.io_gpf import read_gpf from plio.io.io_gpf import read_gpf
from plio.io.io_gpf import save_gpf
from plio.examples import get_path from plio.examples import get_path
import filecmp
import pytest import pytest
@pytest.fixture @pytest.fixture
def insight_gpf(): def insight_gpf():
return get_path('InSightE08_XW.gpf') return get_path('InSightE08_XW.gpf')
def out_insight_gpf():
return get_path('out_InSightE08_XW.gpf')
@pytest.fixture() @pytest.fixture()
def insight_expected(): def insight_expected():
return pd.read_csv(get_path('InSightE08_XW.csv')) return pd.read_csv(get_path('InSightE08_XW.csv'))
...@@ -19,3 +25,10 @@ def insight_expected(): ...@@ -19,3 +25,10 @@ def insight_expected():
def test_read_gfp(gpf, expected): def test_read_gfp(gpf, expected):
df = read_gpf(gpf) df = read_gpf(gpf)
assert_frame_equal(df, expected) assert_frame_equal(df, expected)
@pytest.mark.parametrize('gpf, out_gpf', [(insight_gpf(),out_insight_gpf())])
def test_write_gfp(gpf, out_gpf):
df = read_gpf(gpf)
val = save_gpf(df, out_gpf)
assertTrue(filecmp.cmp(gpf, out_gpf, shallow=True), "save_gpf does not create an equal file.")
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