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ih.cal_flat_field_lamp.status = m_obContext.flat_field_lamp == "ON";
ih.cal_flat_field_lamp.type = m_obContext.flat_field_lamp;
ih.cal_fiber_focus_lamp.status = m_obContext.focus_lamp == "ON";
ih.cal_fiber_focus_lamp.type = m_obContext.focus_lamp;
ih.cal_fiber_defocus_lamp.status = m_obContext.defocus_lamp == "ON";
ih.cal_fiber_defocus_lamp.type = m_obContext.defocus_lamp;
if(m_pGetRtcStatus)
{
for(std::map<std::string, std::string>::iterator itRtc = m_rtcKeywords.begin(); itRtc != m_rtcKeywords.end(); itRtc++)
{
if(!(m_bFastSavingMode && itRtc->first == "TTSENSORTEMP"))
itRtc->second = m_pGetRtcStatus(itRtc->first);
{
m_TcsPreset = m_pGetTcsPreset();
}
float SeqDataMgr::getMeanTemperature()
{
const std::map<std::string, indi::IElement> & elementsA = sharknirTemperatureDetector.getElements();
float valueA = 0.f, valueB = 0.f;
bool bValueA = false, bValueB = false;
if(elementsA.find("value") != elementsA.end())
{
valueA = elementsA.find("value")->second.get<float>();
bValueA = true;
}
const std::map<std::string, indi::IElement> & elementsB = sharknirTemperatureColdFinger.getElements();
if(elementsB.find("value") != elementsB.end())
{
valueB = elementsB.find("value")->second.get<float>();
bValueB = true;
}
float meanTemperature = 0.f;
if(bValueA)meanTemperature += valueA;
if(bValueB)meanTemperature += valueB;
if(bValueA && bValueB)meanTemperature /= 2.f;
return meanTemperature;
}
int SeqDataMgr::getJsonStatus(std::string & jsonStatus)
{
int status = EXIT_SUCCESS;
const std::map<std::string, indi::IElement> & temperatureA_elements = sharknirTemperatureDetector.getElements();
if(temperatureA_elements.find("value") != temperatureA_elements.end())
valueA = temperatureA_elements.find("value")->second.get<float>();
}
{
std::stringstream json_alias;
json_alias << "\"sasha_temp\": { \"name\": \"sasha_temp\", \"value\": \"" << valueA << "\"}";
jsonStatus += json_alias.str();
const std::map<std::string, indi::IElement> & nreads_elements = sashaNumReads.getElements();
int NREADS = 0;
if(nreads_elements.find("value") != nreads_elements.end())
NREADS = nreads_elements.find("value")->second.get<int>();
}
{
std::stringstream json_alias;
json_alias << "\"NREADS\": { \"name\": \"NREADS\", \"value\": \"" << NREADS << "\"}";
const std::map<std::string, indi::IElement> & ncoadds_elements = sashaNumCoadds.getElements();
int NCOADDS = 0;
if(ncoadds_elements.find("value") != ncoadds_elements.end())
NCOADDS = ncoadds_elements.find("value")->second.get<int>();
}
{
std::stringstream json_alias;
json_alias << "\"NCOADDS\": { \"name\": \"NCOADDS\", \"value\": \"" << NCOADDS << "\"}";
const std::map<std::string, indi::IElement> & ndrops_elements = sashaNumDrops.getElements();
int NDROPS = 0;
if(ndrops_elements.find("value") != ndrops_elements.end())
NDROPS = ndrops_elements.find("value")->second.get<int>();
}
{
std::stringstream json_alias;
json_alias << "\"NDROPS\": { \"name\": \"NDROPS\", \"value\": \"" << NDROPS << "\"}";
const std::map<std::string, indi::IElement> & ngroups_elements = sashaNumGroups.getElements();
int NGROUPS = 0;
if(ngroups_elements.find("value") != ngroups_elements.end())
NGROUPS = ngroups_elements.find("value")->second.get<int>();
}
{
std::stringstream json_alias;
json_alias << "\"NGROUPS\": { \"name\": \"NGROUPS\", \"value\": \"" << NGROUPS << "\"}";
const std::map<std::string, indi::IElement> & ndit_elements = sashaNumSeqs.getElements();
if(ndit_elements.find("value") != ndit_elements.end())
NDIT = ndit_elements.find("value")->second.get<int>();
}
{
std::stringstream json_alias;
json_alias << "\"NDIT\": { \"name\": \"NDIT\", \"value\": \"" << NDIT << "\"}";
// GET NCPA loaded and status
if(m_obContext.ncpa_rotation_status != "")
{
std::stringstream json_alias;
jsonStatus += ", ";
json_alias << "\"ncpa_rot_status\": { \"name\": \"ncpa_rot_status\", \"value\": \"" << m_obContext.ncpa_rotation_status << "\"}";
jsonStatus += json_alias.str();
}
if(m_obContext.ncpa_file != "")
{
std::stringstream json_alias;
jsonStatus += ", ";
json_alias << "\"ncpa_file_loaded\": { \"name\": \"ncpa_file_loaded\", \"value\": \"" << m_obContext.ncpa_file << "\"}";
jsonStatus += json_alias.str();
}
void SeqDataMgr::setFlags(uint64_t flags, uint64_t more_flags)
{
if(flags & shins::flags::SAVE_INCOMING_SASHA_FILES)
{
m_bSaveIncomingBlob = true;
U9_LLOG("Save Incoming Sasha files : " << "ON");
}
if(flags & shins::flags::SEQDATA_TEST01)
{
m_bTest01 = true;
U9_LLOG("SeqIDataMgr TEST01 : " << "ON");
}
if(flags & shins::flags::SAVE_ONLY_EXPOSED_SASHA_FILES)// 2
{
if(!m_bSaveOnlyExposedFiles)
{
m_bSaveOnlyExposedFiles = true;
m_bFlagChanged = true;
}
U9_LLOG("Save only exposed files : " << "ON");
}
if(flags & shins::flags::SEQDATA_FORCE_PROPERTY_SET)
{
m_bForcePropertySet = true;
U9_LLOG("SeqIDataMgr Force Property Set : " << "ON");
}
if(flags & shins::flags::FAST_SAVING_MODE)
{
updateInstrumentHeader();
m_bFastSavingMode = true;
U9_LLOG("SeqIDataMgr Fast Saving Mode Set : ON");
}
};
void SeqDataMgr::unsetFlags(uint64_t flags, uint64_t more_flags)
{
if(flags & shins::flags::SAVE_INCOMING_SASHA_FILES)
{
m_bSaveIncomingBlob = false;
U9_LLOG("Save Incoming Sasha files : " << "OFF");
}
if(flags & shins::flags::SEQDATA_TEST01)
{
m_bTest01 = false;
U9_LLOG("SeqIDataMgr TEST01 : " << "OFF");
}
if(flags & shins::flags::SAVE_ONLY_EXPOSED_SASHA_FILES)// 2
{
if(m_bSaveOnlyExposedFiles)
{
m_bSaveOnlyExposedFiles = false;
m_bFlagChanged = true;
}
U9_LLOG("Save only exposed files : " << "OFF");
}
if(flags & shins::flags::SEQDATA_FORCE_PROPERTY_SET)
{
m_bForcePropertySet = false;
U9_LLOG("SeqIDataMgr Force Property Set : " << "OFF");
}
if(flags & shins::flags::FAST_SAVING_MODE)
{
m_bFastSavingMode = false;
U9_LLOG("SeqIDataMgr Fast Saving Mode Set : OFF");
}
void SeqDataMgr::toggleFlags(uint64_t flags, uint64_t more_flags)
{
if(flags & shins::flags::SAVE_INCOMING_SASHA_FILES)
{
m_bSaveIncomingBlob = !m_bSaveIncomingBlob;
U9_LLOG("Save incoming Sasha files : " << (m_bSaveIncomingBlob ? "ON" : "OFF"));
}
if(flags & shins::flags::SEQDATA_TEST01)
{
m_bTest01 = !m_bTest01;
U9_LLOG("SeqIDataMgr TEST01 : " << (m_bTest01 ? "ON" : "OFF"));
}
if(flags & shins::flags::SAVE_ONLY_EXPOSED_SASHA_FILES) // 2
{
m_bSaveOnlyExposedFiles = !m_bSaveOnlyExposedFiles;
m_bFlagChanged = true;
U9_LLOG("Save only exposed files : " << (m_bSaveOnlyExposedFiles ? "ON" : "OFF"));
}
if(flags & shins::flags::SEQDATA_FORCE_PROPERTY_SET)
{
m_bForcePropertySet = !m_bForcePropertySet;
U9_LLOG("SeqIDataMgr Force Property Set : " << (m_bForcePropertySet ? "ON" : "OFF"));
}
if(flags & shins::flags::FAST_SAVING_MODE)
{
if(!m_bFastSavingMode)
{
updateInstrumentHeader();
}
m_bFastSavingMode = !m_bFastSavingMode;
U9_LLOG("SeqIDataMgr Fast Saving Mode Set : " << (m_bFastSavingMode ? "ON" : "OFF"));
}