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Commit 4584cbd3 authored by Giovanni La Mura's avatar Giovanni La Mura
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Enable LAPACK detection configuration

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build/Makefile.am
+ 1
− 1
View file @ 4584cbd3
AUTOMAKE_OPTIONS=subdir-objects
LDADD=libnptm/libnptm.la -L/usr/lib64 $(HDF5_LDFLAGS)
LDADD=libnptm/libnptm.la -L/usr/lib64 ${HDF5_LDFLAGS} ${LAPACK_LDFLAGS}
lib_LTLIBRARIES=libnptm/libnptm.la
libnptm_libnptm_la_SOURCES=../src/libnptm/algebraic.cpp ../src/libnptm/clu_subs.cpp ../src/libnptm/Commons.cpp ../src/libnptm/Configuration.cpp ../src/libnptm/file_io.cpp ../src/libnptm/lapack_calls.cpp ../src/libnptm/logging.cpp ../src/libnptm/magma_calls.cpp ../src/libnptm/Parsers.cpp ../src/libnptm/sph_subs.cpp ../src/libnptm/tfrfme.cpp ../src/libnptm/TransitionMatrix.cpp ../src/libnptm/tra_subs.cpp ../src/libnptm/types.cpp
bin_PROGRAMS=cluster/edfb_clu cluster/clu cluster/np_cluster sphere/edfb_sph sphere/sph sphere/np_sphere trapping/frfme trapping/lffft trapping/np_trapping
......
build/configure.ac
+ 191
− 113
View file @ 4584cbd3
# CAPABILITY TESTING MACROS
m4_define(
[M4_HDF5_LIB],
[cat > nptm_test_hdf5.cpp <<EOF
[M4_HDF5_LIB],
[
cat > nptm_test_hdf5.cpp <<EOF
#include <hdf5.h>
int main(int argc, char **argv) {
hid_t file_id = 0;
......@@ -9,14 +10,30 @@ int main(int argc, char **argv) {
return (int)status;
}
EOF
$CXX -o nptm_test_hdf5 nptm_test_hdf5.cpp -I$HDF5_INCLUDE -L$HDF5_LIB -lhdf5 > /dev/null 2>>error.log
export TEST_HDF5_LIB=$?
rm nptm_test_hdf5.cpp
if test "x$TEST_HDF5_LIB" = "x0"; then
rm nptm_test_hdf5
fi]
$CXX -o nptm_test_hdf5 nptm_test_hdf5.cpp -I$HDF5_INCLUDE -L$HDF5_LIB -lhdf5 > /dev/null 2>>error.log
export TEST_HDF5_LIB=$?
rm nptm_test_hdf5.cpp
if test "x$TEST_HDF5_LIB" = "x0"; then
rm nptm_test_hdf5
fi
]
)
m4_define(
[M4_DETECT_LAPACK],
[
LAPACK_ROOT=$MKLROOT
if test "x$LAPACK_ROOT" != "x"; then
export LAPACK_INCLUDE=$(MKLROOT)/include
export LAPACK_LIB=$(MKLROOT)/lib
export LAPACK_LIBRARY="-Wl,--no-as-needed -lmkl_intel_ilp64 -lmkl_gnu_thread -lmkl_core -lgomp -lpthread -lm -ldl"
else
export LAPACK_INCLUDE=/usr/include
export LAPACK_LIB=/lib/x86_64-linux-gnu
export LAPACK_LIBRARY="-llapacke64"
fi
]
)
# END CAPABILITY TESTING MACROS
# autoconf setup initialization
......@@ -34,130 +51,191 @@ AM_INIT_AUTOMAKE([-Wall -Werror foreign])
# Compiler detection
AM_PROG_AR
AC_ARG_ENABLE(
[mpi],
[AS_HELP_STRING([--enable-mpi], [use MPI if available (default is yes)])],
[
if test "x$enableval" = "xno"; then
if test "x$F77" = "xmpif90"; then
gfortran --version > /dev/null
if test "x$?" = "x0"; then
export F77=gfortran
fi
fi
if test "x$F77" = "xmpif90"; then
f77 --version > /dev/null
if test "x$?" = "x0"; then
export F77=f77
fi
fi
if test "x$CXX" = "xmpicxx"; then
g++ --version > /dev/null
if test "x$?" = "x0"; then
export CXX=g++
fi
fi
if test "x$CXX" = "xmpicxx"; then
clang --version > /dev/null
if test "x$?" = "x0"; then
export CXX=clang
fi
fi
if test "x$F77" = "x"; then
gfortran --version > /dev/null
if test "x$?" = "x0"; then
export F77=gfortran
fi
fi
if test "x$F77" = "x"; then
f77 --version > /dev/null
if test "x$?" = "x0"; then
export F77=f77
fi
fi
if test "x$CXX" = "x"; then
g++ --version > /dev/null
if test "x$?" = "x0"; then
export CXX=g++
fi
fi
if test "x$CXX" = "x"; then
clang --version > /dev/null
if test "x$?" = "x0"; then
export CXX=clang
fi
fi
else
mpicxx --version > /dev/null
if test "x$?" = "x0"; then
export CXX=mpicxx
export F77=mpif90
else
AC_MSG_ERROR(["MPI was enabled, but no MPI compiler was found!"])
fi
fi
],
[
if test "x$CXX" = "x"; then
mpicxx --version > /dev/null
if test "x$?" = "x0"; then
export CXX=mpicxx
export F77=mpif90
fi
fi
if test "x$CXX" = "x"; then
g++ --version > /dev/null
if test "x$?" = "x0"; then
export CXX=g++
fi
fi
if test "x$CXX" = "x"; then
clang --version > /dev/null
if test "x$?" = "x0"; then
export CXX=clang
fi
fi
]
[mpi],
[AS_HELP_STRING([--enable-mpi], [use MPI if available [default=yes]])],
[
if test "x$enableval" = "xno"; then
if test "x$F77" = "xmpif90"; then
gfortran --version > /dev/null
if test "x$?" = "x0"; then
AC_SUBST([F77], [gfortran])
fi
fi
if test "x$F77" = "xmpif90"; then
f77 --version > /dev/null
if test "x$?" = "x0"; then
#export F77=f77
AC_SUBST([F77], [f77])
fi
fi
if test "x$CXX" = "xmpicxx"; then
g++ --version > /dev/null
if test "x$?" = "x0"; then
#export CXX=g++
AC_SUBST([CXX], [g++])
fi
fi
if test "x$CXX" = "xmpicxx"; then
clang --version > /dev/null
if test "x$?" = "x0"; then
#export CXX=clang
AC_SUBST([CXX], [clang])
fi
fi
if test "x$F77" = "x"; then
gfortran --version > /dev/null
if test "x$?" = "x0"; then
#export F77=gfortran
AC_SUBST([F77], [gfortran])
fi
fi
if test "x$F77" = "x"; then
f77 --version > /dev/null
if test "x$?" = "x0"; then
#export F77=f77
AC_SUBST([F77], [f77])
fi
fi
if test "x$CXX" = "x"; then
g++ --version > /dev/null
if test "x$?" = "x0"; then
#export CXX=g++
AC_SUBST([CXX], [g++])
fi
fi
if test "x$CXX" = "x"; then
clang --version > /dev/null
if test "x$?" = "x0"; then
#export CXX=clang
AC_SUBST([CXX], [clang])
fi
fi
else
mpicxx --version > /dev/null
if test "x$?" = "x0"; then
#export CXX=mpicxx
#export F77=mpif90
AC_SUBST([CXX], [mpicxx])
AC_SUBST([F77], [mpif90])
else
AC_MSG_ERROR(["MPI was enabled, but no MPI compiler was found!"])
fi
fi
],
[
if test "x$CXX" = "x"; then
mpicxx --version > /dev/null
if test "x$?" = "x0"; then
#export CXX=mpicxx
#export F77=mpif90
AC_SUBST([CXX], [mpicxx])
AC_SUBST([F77], [mpif90])
fi
fi
if test "x$CXX" = "x"; then
g++ --version > /dev/null
if test "x$?" = "x0"; then
#export CXX=g++
AC_SUBST([CXX], [g++])
fi
fi
if test "x$CXX" = "x"; then
clang --version > /dev/null
if test "x$?" = "x0"; then
#export CXX=clang
AC_SUBST([CXX], [clang])
fi
fi
]
)
AC_SUBST([CXX])
AC_PROG_CXX(CXX)
AC_SUBST([F77])
AC_PROG_F77([$F77 mpif90 gfortran f77])
AC_PROG_CXX([$CXX])
AC_PROG_F77([$F77])
# Libtool initialization
LT_INIT
# Environment setup
AS_IF(
[test "x$HDF5_INCLUDE" = "x"],
[export HDF5_INCLUDE=/usr/include/hdf5/serial],
[AC_MSG_NOTICE(["HDF5_INCLUDE=$HDF5_INCLUDE"])]
[test "x$HDF5_INCLUDE" = "x"],
[AC_SUBST([HDF5_INCLUDE], ["/usr/include/hdf5/serial"])],
[AC_MSG_NOTICE([HDF5_INCLUDE=$(HDF5_INCLUDE)])]
)
AS_IF(
[test "x$HDF5_LIB" = "x"],
[export HDF5_LIB=/usr/lib/x86_64-linux-gnu/hdf5/serial],
[AC_MSG_NOTICE(["HDF5_LIB=$HDF5_LIB"])]
[test "x$HDF5_LIB" = "x"],
[AC_SUBST([HDF5_LIB], ["/usr/lib/x86_64-linux-gnu/hdf5/serial"])],
[AC_MSG_NOTICE([HDF5_LIB=$(HDF5_LIB)])]
)
FFLAGS="-std=legacy -O3"
CXXFLAGS="-O3 -ggdb -Wno-format-contains-nul -I $HDF5_INCLUDE"
SUBDIRS="cluster libnptm sphere testing trapping"
# Check for required headers
AC_CHECK_HEADER(
[$HDF5_INCLUDE/hdf5.h],
,
AC_MSG_ERROR(["Could not find HDF5 headers!]),
)
[$HDF5_INCLUDE/hdf5.h],
,
AC_MSG_ERROR(["Could not find HDF5 headers!]),
)
# Check for required libraries
M4_HDF5_LIB
AS_IF(
[test "x$TEST_HDF5_LIB" = "x0"],
[export HDF5_LDFLAGS="-L${HDF5_LIB} -lhdf5"],
[AC_MSG_ERROR(["HDF5 library not found!"])]
[test "x$TEST_HDF5_LIB" = "x0"],
[AC_SUBST([HDF5_LDFLAGS], ["-L${HDF5_LIB} -lhdf5"])],
[AC_MSG_ERROR(["HDF5 library not found!"])]
)
AC_SUBST([HDF5_LDFLAGS])
# Configure the optional features
M4_DETECT_LAPACK
AS_IF(
[test "x$LAPACK_LIBRARY" != "x"],
[AC_MSG_NOTICE([LAPACK detected])],
[AC_MSG_NOTICE([No LAPACK found])]
)
AC_ARG_ENABLE(
[openmp],
[AS_HELP_STRING([--enable-openmp], [enable OpneMP multi-threading [default=yes]])],
[
if test "x$enableval" != "xno"; then
AC_SUBST([OMPFLAGS], ["-fopenmp"])
fi
],
[
AC_SUBST([OMPFLAGS], ["-fopenmp"])
]
)
AC_ARG_WITH(
[lapack],
[AS_HELP_STRING([--with-lapack], [use LAPACK @<:@default=check@:>@])],
[
if test "x$withval" = "xno"; then
AC_SUBST([LAPACK_FLAGS], [""])
AC_SUBST([LAPACK_LDFLAGS], [""])
fi
],
[
if test "x$LAPACK_INCLUDE" != "x"; then
AC_SUBST([LAPACK_FLAGS], ["-DUSE_LAPACK -DLAPACK_ILP64 -DUSE_ILP64 -I${LAPACK_INCLUDE}"])
AC_SUBST([LAPACK_LDFLAGS], ["-L${LAPACK_LIB} ${LAPACK_LIBRARY}"])
fi
]
)
AC_ARG_WITH(
[magma],
[AS_HELP_STRING([--with-magma], [use MAGMA @<:@default=check@:>@])],
[],
[]
)
AC_ARG_ENABLE(
[ilp64],
[AS_HELP_STRING([--enable-ilp64], [use MAGMA @<:@default=check@:>@])],
[],
[]
)
FFLAGS="-std=legacy -O3"
CXXFLAGS="-O3 -ggdb -Wno-format-contains-nul -I$HDF5_INCLUDE $OMPFLAGS $LAPACK_FLAGS"
SUBDIRS="cluster libnptm sphere testing trapping"
# Send output to Makefiles
AC_CONFIG_FILES([Makefile])
......
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