Makefile

LDFLAGS       =  -L ${LIB_CFITSIO} -L ${LIB_GSL}  -L ${LIB_MPI}  -lcfitsio   -lm   -lgsl   -lgslcblas -lmpi
INCLUDE       =  -I ${PWD}  -I ${HEADERS_CFITSIO}  -I ${HEADERS_GSL}  -I ${HEADERS_MPI} -I ${MC_INSTDIR}/../../include/

CFLAGS   = -g  -Ofast -Wall   ${INCLUDE}


LOCAL_DIR               = ${PWD}
MC_SLAB                 = ${MC_INSTDIR}/../../gr_code/slab_rte
MC_POLARIZATION   	= ${MC_INSTDIR}/polarization
MC_ELE_DISTRIBUTION     = ${MC_INSTDIR}/electron_distributions
MC_GENERAL 		= ${MC_INSTDIR}/general_routines/
MC_COORD   		= ${MC_INSTDIR}/coordinates_systems
MC_SEED    		= ${MC_INSTDIR}/seed_photons/
MC_HYDRO                = ${MC_INSTDIR}/../../gr_code/hydrodynamics
MC_SYNC                 = ${MC_INSTDIR}/../../gr_code/synchrotron


#========================================================================


LOCAL_DIR_OBJ=  ${LOCAL_DIR}/main_program.o   ${LOCAL_DIR}/check_results.o  ${LOCAL_DIR}/compute_results.o ${LOCAL_DIR}/function_integrals.o ${LOCAL_DIR}/legendre_integration.o ${LOCAL_DIR}/set_deltatau.o ${LOCAL_DIR}/slab_polarization.o ${LOCAL_DIR}/solve_rte.o ${LOCAL_DIR}/mc_slab.o ${LOCAL_DIR}/compute_stokes.o ${LOCAL_DIR}/collect_photons.o  

MC_POLARIZATION_OBJ=${MC_POLARIZATION}/ortonormal_axes.o ${MC_POLARIZATION}/unpolarized_seedphot.o ${MC_POLARIZATION}/polarization_probability.o ${MC_POLARIZATION}/depolarization_probability.o ${MC_POLARIZATION}/electfield_as_new.o ${MC_POLARIZATION}/sample_azim_angle.o ${MC_POLARIZATION}/allocate_stokes_pointer.o ${MC_POLARIZATION}/disk_polarizationelectricfield.o ${MC_POLARIZATION}/pdeg_atmosphere.o ${MC_POLARIZATION}/write_polardata.o ${MC_POLARIZATION}/select_quadrant.o $ ${MC_POLARIZATION}/detector_axis.o

MC_ELE_DISTRIBUTION_OBJ=${MC_ELE_DISTRIBUTION}/hybrid/eledist_hybrid.o ${MC_ELE_DISTRIBUTION}/hybrid/integrate_maxwgamma.o ${MC_ELE_DISTRIBUTION}/sample_electron.o ${MC_ELE_DISTRIBUTION}/powerlaw/eledist_nth.o ${MC_ELE_DISTRIBUTION}/maxwellian/subrel_maxwellian.o

MC_COORD_OBJ=${MC_COORD}/versor_boost.o ${MC_COORD}/elmag_lorentztransform.o 

MC_GENERAL_OBJ=${MC_INSTDIR}/../../gr_code/clock_random.o ${MC_INSTDIR}/../../gr_code/dmatrix.o ${MC_INSTDIR}/../../gr_code/round_to_digits.o ${MC_INSTDIR}/general_routines/gauleg.o ${MC_INSTDIR}/general_routines/numpar.o ${MC_INSTDIR}/general_routines/stringpar.o ${MC_INSTDIR}/general_routines/strrev.o ${MC_INSTDIR}/general_routines/stringconcat.o ${MC_INSTDIR}/general_routines/interpolate_kn.o ${MC_INSTDIR}/../../gr_code/dot_prod.o  ${MC_GENERAL}/read_array.o ${MC_INSTDIR}/../../gr_code/vect_prod.o ${MC_GENERAL}/read_matrix.o ${MC_GENERAL}/energy_lorentz_boost.o ${MC_GENERAL}/new_energy_erf.o ${MC_GENERAL}/make_array_angles.o ${MC_INSTDIR}/../../gr_code/init_mpi.o ${MC_INSTDIR}/../../gr_code/abs_val.o ${MC_GENERAL}/make_array_energy.o

MC_SEED_OBJ=${MC_SEED}/bb_spec.o

MC_HYDRO_OBJ=${MC_HYDRO}/reverse_array.o

MC_SYNC_OBJ=${MC_SYNC}/envelop_gaussian.o ${MC_SYNC}/optimize_envelop.o ${MC_SYNC}/sync_distribution.o ${MC_SYNC}/setup_syncvariables.o

MC_SLAB_OBJ=${MC_SLAB}/electricfield_fromfile.o ${MC_SLAB}/read_resultsfile.o  ${MC_SLAB}/setup_gsl_objects.o ${MC_SLAB}/compute_cumulative_angdist.o 


all:  start_iteration

%.o: %.c $(DEPS)
	$(CC) -c  -o  $@ $< $(CFLAGS)

start_iteration:  ${LOCAL_DIR_OBJ} ${MC_GENERAL_OBJ} ${MC_POLARIZATION_OBJ} ${MC_ELE_DISTRIBUTION_OBJ} ${MC_COORD_OBJ} ${MC_SEED_OBJ}   ${MC_HYDRO_OBJ} ${MC_SLAB_OBJ} ${MC_SYNC_OBJ}
	${CC} $^ -o $@ ${LDFLAGS} 


clean:
	rm -f main_program.o ${LOCAL_DIR_OBJ} ${MC_GENERAL_OBJ} ${MC_POLARIZATION_OBJ} ${MC_ELE_DISTRIBUTION_OBJ} ${MC_COORD_OBJ} ${MC_SEED_OBJ}   ${MC_HYDRO_OBJ} ${MC_SLAB_OBJ} ${MC_SYNC_OBJ}	


ciao:
	echo ${MC_SLAB_OBJ}